Rhodium in PDB 4gjv: Streptavidin-S112H

The structure of Streptavidin-S112H, PDB code: 4gjv was solved by T.Heinisch, T.Schirmer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.88 / 2.40
Space group	I 41 2 2
Cell size a, b, c (Å), α, β, γ (°)	57.580, 57.580, 183.760, 90.00, 90.00, 90.00
R / Rfree (%)	18.5 / 23

The structure of Streptavidin-S112H also contains other interesting chemical elements:

Chlorine

(Cl)

4 atoms

The binding sites of Rhodium atom in the Streptavidin-S112H (pdb code 4gjv). This binding sites where shown within 5.0 Angstroms radius around Rhodium atom.
In total 2 binding sites of Rhodium where determined in the Streptavidin-S112H, PDB code: 4gjv:
Jump to Rhodium binding site number: 1; 2;

Rhodium binding site 1 out of 2 in the Streptavidin-S112H


Mono view


Stereo pair view

A full contact list of Rhodium with other atoms in the Rh binding site number 1 of Streptavidin-S112H within 5.0Å range: probe atom residue distance (Å) B Occ A:Rh400 b:83.7 occ:1.00 RH A:0OD400 0.0 83.7 1.0 C14 A:0OD400 2.1 62.2 1.0 C17 A:0OD400 2.1 65.7 1.0 C13 A:0OD400 2.1 63.7 1.0 C15 A:0OD400 2.1 64.3 1.0 C16 A:0OD400 2.1 64.4 1.0 ND1 A:HIS112 2.3 69.8 0.9 CE1 A:HIS112 3.1 70.8 0.9 C18 A:0OD400 3.2 65.5 1.0 C21 A:0OD400 3.2 67.0 1.0 C12 A:0OD400 3.2 52.5 1.0 C19 A:0OD400 3.2 71.7 1.0 C20 A:0OD400 3.2 62.4 1.0 CG A:HIS112 3.4 58.2 0.9 CB A:HIS112 3.9 43.4 0.9 NE2 A:HIS112 4.3 68.1 0.9 C11 A:0OD400 4.4 39.2 1.0 CD2 A:HIS112 4.5 66.2 0.9

Rhodium binding site 2 out of 2 in the Streptavidin-S112H


Mono view


Stereo pair view

A full contact list of Rhodium with other atoms in the Rh binding site number 2 of Streptavidin-S112H within 5.0Å range: probe atom residue distance (Å) B Occ A:Rh403 b:79.2 occ:1.00 NE2 A:HIS127 2.3 39.3 1.0 CD2 A:HIS127 3.1 39.4 1.0 CE1 A:HIS127 3.3 29.5 1.0 O A:HOH519 4.1 30.4 1.0 CG A:HIS127 4.3 33.7 1.0 ND1 A:HIS127 4.4 27.0 1.0

J.M.Zimbron, T.Heinisch, M.Schmid, D.Hamels, E.S.Nogueira, T.Schirmer, T.R.Ward. A Dual Anchoring Strategy For the Localization and Activation of Artificial Metalloenzymes Based on the Biotin-Streptavidin Technology. J.Am.Chem.Soc. V. 135 5384 2013.
ISSN: ISSN 0002-7863
PubMed: 23496309
DOI: 10.1021/JA309974S