Rhodium in PDB 3a91: Crystal Structure of Hen Egg White Lysozyme Soaked with 5MM RHCL3

Enzymatic activity of Crystal Structure of Hen Egg White Lysozyme Soaked with 5MM RHCL3

All present enzymatic activity of Crystal Structure of Hen Egg White Lysozyme Soaked with 5MM RHCL3:
3.2.1.17;

Protein crystallography data

The structure of Crystal Structure of Hen Egg White Lysozyme Soaked with 5MM RHCL3, PDB code: 3a91 was solved by S.Abe, T.Koshiyama, T.Ohki, T.Hikage, Y.Watanabe, T.Ueno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	18.41 / 1.55
*Space group*	P 4₃ 2₁ 2
*Cell size a, b, c (Å), α, β, γ (°)*	78.122, 78.122, 37.151, 90.00, 90.00, 90.00
*R / R_free (%)*	18.6 / 20.7

Other elements in 3a91:

The structure of Crystal Structure of Hen Egg White Lysozyme Soaked with 5MM RHCL3 also contains other interesting chemical elements:

Chlorine	(Cl)	7 atoms
Sodium	(Na)	1 atom

Rhodium Binding Sites:

The binding sites of Rhodium atom in the Crystal Structure of Hen Egg White Lysozyme Soaked with 5MM RHCL3 (pdb code 3a91). This binding sites where shown within 5.0 Angstroms radius around Rhodium atom.
In total only one binding site of Rhodium was determined in the Crystal Structure of Hen Egg White Lysozyme Soaked with 5MM RHCL3, PDB code: 3a91:

Rhodium binding site 1 out of 1 in 3a91

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Rhodium Binding Sites List in 3a91

Rhodium binding site 1 out of 1 in the Crystal Structure of Hen Egg White Lysozyme Soaked with 5MM RHCL3

Mono view

Stereo pair view

A full contact list of Rhodium with other atoms in the Rh binding site number 1 of Crystal Structure of Hen Egg White Lysozyme Soaked with 5MM RHCL3 within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Rh138 b:34.8 occ:0.40	NH1	A:ARG14	2.3	29.1	1.0
	NE2	A:HIS15	2.5	23.9	1.0
	NH2	A:ARG14	2.5	28.8	1.0
	CZ	A:ARG14	2.8	27.6	1.0
	CL	A:CL136	3.0	34.1	1.0
	CE1	A:HIS15	3.3	24.7	1.0
	CD2	A:HIS15	3.5	23.0	1.0
	NE	A:ARG14	4.1	27.5	1.0
	OD1	A:ASP87	4.2	23.9	1.0
	ND1	A:HIS15	4.5	24.8	1.0
	OG1	A:THR89	4.5	19.4	1.0
	CG	A:HIS15	4.6	21.2	1.0
	O	A:HOH198	4.8	33.5	1.0
	CG	A:ASP87	4.9	23.1	1.0

Reference:

T.Ueno, S.Abe, T.Koshiyama, T.Ohki, T.Hikage, Y.Watanabe. Elucidation of Metal-Ion Accumulation Induced By Hydrogen Bonds on Protein Surfaces By Using Porous Lysozyme Crystals Containing Rh(III) Ions As the Model Surfaces Chemistry V. 16 2730 2010.
ISSN: ISSN 0947-6539
PubMed: 20146274
DOI: 10.1002/CHEM.200903269

Page generated: Thu Oct 10 12:33:10 2024

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