Rhodium in PDB 1iha: Structure of the Hybrid Rna/Dna R-Gcuucggc-D[Br]U in Presence of Rh(NH3)6+++

The structure of Structure of the Hybrid Rna/Dna R-Gcuucggc-D[Br]U in Presence of Rh(NH3)6+++, PDB code: 1iha was solved by W.B.Cruse, P.Saludjian, A.Neuman, T.Prange, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	1.75 / 1.60
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	53.800, 19.400, 50.310, 90.00, 109.90, 90.00
R / Rfree (%)	16.1 / 19.6

The structure of Structure of the Hybrid Rna/Dna R-Gcuucggc-D[Br]U in Presence of Rh(NH3)6+++ also contains other interesting chemical elements:

Bromine	(Br)	3 atoms
Chlorine	(Cl)	2 atoms

The binding sites of Rhodium atom in the Structure of the Hybrid Rna/Dna R-Gcuucggc-D[Br]U in Presence of Rh(NH3)6+++ (pdb code 1iha). This binding sites where shown within 5.0 Angstroms radius around Rhodium atom.
In total 2 binding sites of Rhodium where determined in the Structure of the Hybrid Rna/Dna R-Gcuucggc-D[Br]U in Presence of Rh(NH3)6+++, PDB code: 1iha:
Jump to Rhodium binding site number: 1; 2;

Rhodium binding site 1 out of 2 in the Structure of the Hybrid Rna/Dna R-Gcuucggc-D[Br]U in Presence of Rh(NH3)6+++


Mono view


Stereo pair view

A full contact list of Rhodium with other atoms in the Rh binding site number 1 of Structure of the Hybrid Rna/Dna R-Gcuucggc-D[Br]U in Presence of Rh(NH3)6+++ within 5.0Å range: probe atom residue distance (Å) B Occ A:Rh11 b:13.8 occ:1.00 RH A:RHD11 0.0 13.8 1.0 N2 A:RHD11 2.0 17.4 1.0 N5 A:RHD11 2.0 22.7 1.0 N6 A:RHD11 2.0 13.0 1.0 N1 A:RHD11 2.0 17.5 1.0 N3 A:RHD11 2.0 19.4 1.0 N4 A:RHD11 2.0 16.6 1.0 N7 A:G6 3.9 9.9 1.0 OP2 A:G6 4.0 9.7 1.0 O A:HOH137 4.1 26.7 1.0 O B:HOH150 4.2 37.2 1.0 OP2 A:C5 4.3 7.7 1.0 O A:HOH104 4.3 16.8 1.0 O6 A:G7 4.3 7.3 1.0 N7 A:G7 4.5 6.5 1.0 C8 A:G6 4.7 5.6 1.0 O6 A:G6 4.9 7.0 1.0 C5 A:G6 4.9 6.9 1.0

Rhodium binding site 2 out of 2 in the Structure of the Hybrid Rna/Dna R-Gcuucggc-D[Br]U in Presence of Rh(NH3)6+++


Mono view


Stereo pair view

A full contact list of Rhodium with other atoms in the Rh binding site number 2 of Structure of the Hybrid Rna/Dna R-Gcuucggc-D[Br]U in Presence of Rh(NH3)6+++ within 5.0Å range: probe atom residue distance (Å) B Occ A:Rh12 b:17.5 occ:1.00 RH A:RHD12 0.0 17.5 1.0 N3 A:RHD12 2.0 22.7 1.0 N5 A:RHD12 2.0 24.5 1.0 N2 A:RHD12 2.0 15.4 1.0 N4 A:RHD12 2.0 19.5 1.0 N6 A:RHD12 2.0 25.0 1.0 N1 A:RHD12 2.0 17.9 1.0 O2 A:C5 3.8 9.9 1.0 O2 B:C5 4.2 11.9 1.0 O A:HOH143 4.2 33.8 1.0 O A:HOH107 4.6 20.2 1.0 O B:HOH123 4.6 44.2 1.0 O B:HOH109 4.6 14.3 1.0 C2 A:C5 4.9 8.5 1.0

W.Cruse, P.Saludjian, A.Neuman, T.Prange. Destabilizing Effect of A Fluorouracil Extra Base in A Hybrid Rna Duplex Compared with Bromo and Chloro Analogues. Acta Crystallogr.,Sect.D V. 57 1609 2001.
ISSN: ISSN 0907-4449
PubMed: 11679725
DOI: 10.1107/S0907444901012318